Chelsea and Everett both have the density for HRT. If we know we're crossing water bodies, what is restricting Blue from splitting and following the current SLX route, then following overbuilt Rt 1? Say to
https://goo.gl/maps/pL6rA7yUurdxnynf9
(1) If going by golden rule of branching, never a good idea to be halving frequencies before the biggest bus terminal on the line. Granted, in this case that terminal is unbuilt Lynn, but the logic holds. Lynn was supposed to be included in the Revere Extension build from Day 1 as the capstone; the fact that they've made generations of excuses for not doing it doesn't mean the demand never existed. With that being the entirety of the North Shore's bus supply (and unnaturally choked off of headway for 49 years by the distended Wonderland + 1A/downtown running) true demand will quench 3 min. tippy-top headways in a way that no other service fork possibly could. Because no other potential service fork has the density of terminal transfers...or the exponential higher service gear uncorked by enabling denser last-mile service.
So even in a battle of unbuilt 'hypotheticals', you can't find a branching pair match for Lynn anywhere on the map. Not even Chelsea. The deck stacks too high for full-on mainline frequencies to the North Shore's mega bus terminal, or a punitive apportionment of two-thirds frequencies to the mega terminal and paltry one-third on the comparatively transfer-poor branch which starts aggressively undercutting the value proposition of forking at all.
(2) Environmental practicalities. Now...even while talking some megaproject tag-team of underwater Tobin replacement tube'd out next to an underwater HRT transit berth, there's not a lot of new--or newly scary--climate change considerations with sinking another set of tubes across the Harbor. There's terra firma to anchor to on both the Charlestown and Chelsea ends, and the basic build is not a whole lot different than what's already been done 4 times prior with East Boston Tunnel, Sumner, Callahan, and Ted. It's fucking expensive because it's fucking expensive at baseline...not because it's any order-of-magnitude more difficult to do than it was those 4 other times. You could bring the Northeast "X" through the City Square + Navy Yard alongside 1 and take the flying leap at the new Tobin combo-replacement underwater crossing to implement the biggest unique-routed leg in EGE's map. Figure the scruples behind that big build are all tied up in the greater Tobin Next debate and won't be a solo effort in the slightest.
But you can't really say the same (i.e. "big $$$ isn't a commentary on feasibility") about crossing the marsh when the pants-shitting terrifying flood profile looms as a brand new impediment never before tackled to such severe degree before. As is, BLX-Lynn is going to have to make some hard choices because the "skip everything" Alt. that cuts straight from Revere St. right past Wonderland on a 2000 ft. long trestle across Diamond Creek, over 1A, then over the first slab of marshland to the Eastern Route figures to be an EIS'ing cost meltdown. It's quite likely that the "split the difference" Alt. to Oak Island + curbing along the Little League outfield fence to the scaffolding supply lot is going to be such enormously lower-impact that engaging the kinda-close abutters at the Satter House overrules the all-NIMBY's avoidance "skip everything" because that swamp trestle vs. 50-year flood drainage risk assessment makes it a neutron-bomb level blowout.
I think you're looking at very nearly the same no-practical-go environmental assessment if crossing any of the wider swath of swamp between the Eastern and MA 107. If it's not on the Route 1 ghost ramp grading that whole basin is a practical no-go. And of course...avoiding the basin as no-go means likely forking the branch earlier. In absolute terms that's a bad idea because of #1...but if you have to jump at, say, Suffolk Downs, that's really going to weaken things a ton because the 110, 117, 119 all hit Revere Beach and Beachmont as trans-Revere/Chelsea routes which weakens the ecosystem around a Chelsea-leaning branch.
Now...say that "Reddish-Orange" sideloading to Malden Ctr. does succeed at threading something onto the Saugus Branch and opposite-world Malden history isn't that of an El killer. Between Saugus Branch to 1 and the ghost-ramp grading to Saugus River you might be able to supernode 'em both at Lynn Terminal without incurring an EIS'ing blowout because the berm's already built up by the ancient I-95 extension grading. So for crayon-draw purposes your general route still has an intact trajectory free from sinking under the weight of its own EPA permit via the MC/Saugus Br. tie-in, and with cut-rate construction costs on the Sullivan-MC double-up. Just...again...how many abutters do you have to knife-fight for a variable-height El across Malden grade crossing hell? Build-feasible verily...politically doable narily.