Alon Levy wrote about the 16-car trains a few months ago, and went into deep detail on the required station renos:
https://pedestrianobservations.com/2025/02/19/16-car-trains-on-the-northeast-corridor/
You're absolutely correct: the math doesn't add up for a legacy-system retrofit. They're talking about things like radical re-segmentation of platform assignments from local commuter rail agencies to segregate the longest platforms to HSR conflicts-be-damned; outright skipping hard-to-modify stops like Stamford, Trenton, and Back Bay; a major do-over of New Haven because of a conjoined proposal to do a major curve bypass east of the station; ugly hacks like not opening up all doors on the trains at some stops despite that being problematic with reserved seating; and on and on. The station mod cost blowouts are literally going to be in the billions. And that's without even touching the fact that 16-car trains put a tremendous individual strain on the power supply, which likely needs to be upgraded in multiple spots if they're to be run frequently. The thoroughly-mongrel NEC absolutely isn't comparable at all to post-WWII greenfield HSR systems that overrepresent the long-consist HSR ranks, and there's been no effort whatsoever to right-size the associated costs.
I mean, we run 12-car
Regionals every day of the week (absorbing some boarding inconvenience at a few too-short stations), which is 33% more capacity than the 8-car Acela 2's. We could get halfway to target with minimal cost and disruption. But no...somebody in the world did it under completely different circumstances, therefore we've failed by not shooting for absolute perfection damn the logistics.