Summer St, Congress St, SL1, and SL3
https://commonwealthmagazine.org/opinion/buses-not-gondolas-are-the-answer/ has some discussion of the potential for bus lanes on Summer St from about Fort Point Channel to Reserved Channel.
I'm skeptical that the allocation of street space proposed there is optimal. A single freeway lane often carries 1800 vehicles per hour; that claims Summer St only gets 1200 vehicles in the peak hour. Maybe an intersection with a busy cross street might push the capacity of a lane below 1200 vehicles per hour, but I suspect one general purpose travel lane in each direction would turn out to be adequate, and we shouldn't have a second travel lane per direction unless someone can make a strong case that we actually need it. Additionally, it isn't clear to me how the bus stops are expected to work if the bus lane is directly adjacent to the bike lane.
I think we should explore the possibility of adapting
http://amateurplanner.blogspot.com/2016/02/a-complete-mass-ave-in-cambridge.html to Summer St from Fort Point Channel to Reserved Channel; since that part of Summer St seems to be 8' wider than that part of Mass Ave, if we want to cater to cars, rather than having an unnecessary travel lane, we ought to consider converting one side from parallel parking to back in angle parking.
If we end up with bus lanes on the relevant parts of Congress St and Summer St, I think we ought to consider replacing the current SL1 routing with a loop going through the airport terminals, then the Sumner Tunnel, then North Station, Haymarket, Congress St stops at State Street and Franklin St, Summer St stops at South Station, Melcher St, A St, World Trade Center Ave / Convention Center, and D St, and then a Pumphouse Rd stop and back to the airport terminal loop.
I think that entire airport loop might be somewhere around 7-8 miles, in which case an average speed of 16 MPH (including time stopped) would enable it to be completed in a half hour (3 vehicles for 10 minute headways), and if it could be done at an average speed of 21-24 MPH, it could be done in 20 minutes. Particularly if the whole loop could be done in 20 minutes, the time cost of going around the long way might be made up for in the improved headways from serving all of these locations with a single route, especially at off peak times.
The routing in the vicinity of North Station may be tricky, and a compromise of initially omitting North Station might make sense; while that would be unfortunate for Fitchburg Line, Lowell Line, and Haverhill Line riders, skipping North Station might make the route work better for everyone else, and if that's the difference between success and failure, having a success that we could later argue would demonstrate the value of dedicated street space to North Station might be better than having a failure that never gains any traction.
If 111 is generally a better way for Chelsea residents to get to the Orange Line and Green Line than extending SL3 past South Station would be, we might want SL3 after the Ted Williams Tunnel to take the Congress St exit, reallocate the right lane of Congress St as a bus lane from the I-90 exit to Fort Point Channel, and have a stop at the far side of the E Service Rd intersection, keep the existing A St stop, and maybe keep the Sleeper St stop. We might want another stop on Congress St between Dorchester Ave and Atlantic Ave, and a contraflow bus lane on Atlantic Ave to get the bus to South Station, after which it would continue to the Melcher, A St, WTC Ave / Convention, D St, and Pumphouse stops and back to the Ted Williams Tunnel.
The Summer St bus lanes should also include boarding islands at Drydock Ave for the 7.