As one of "those engineers" that you seemingly have disdain for, we are required, as professionals, to utilize Federal Standards (and their local amendments) along with AASHTO standards to design infrastructure with regard to roadways with pedestrian and/or bicycle accommodation.
I don't disdain you so please don't take it personally. I'm just very well versed on cynicism towards traffic engineering, and I think you would agree that it's for a very good reason.
I know I'm gonna regret stating this, but it is simply asinine to design improvements for a heavily trafficked corridor such as Comm ave. with pedestrians as the primary influence. For starters, there's no guideline in place to do so.
Several things: the design of Comm Ave comes from the City of Boston, which has the Boston Complete Streets guidelines, not to mention NACTO, to work with. Second, designing city streets with pedestrians as the primary influence is precisely what should be happening everywhere that it makes sense. I'm not sure if you're aware of this, but: pedestrians and transit users completely dominate Comm Ave usage numbers. Failing to design first for pedestrians would be tantamount to ignoring the biggest, most vulnerable group of street users.
You have to start with something and frankly, there's systems in place for the use of vehicular data as the primary design for roadways with pedestrian accommodation. No designer in their right mind would ever design with pedestrians as the primary source. There's just simply too many variables involved. What's the limiting factor at play here? Vehicles. They are the most dangerous aspect at play, along with the geometry.
The point of these reforms is to establish systems that are different from the old ways. Perhaps in the old days they only counted vehicles and all decisions were made with vehicles in mind. Pedestrians were given whatever scraps of space and time that were left over. I hope that you would agree about that not being the proper way to go about things these days and I hope that in the future it won't be so contentious to design primarily around pedestrians in a city.
Yes, we use LOS as one means to help us figure out cycle lengths. But pedestrian accommodation will be the same regardless if an intersection is a LOS A or a LOS F. You can't let pedestrians walk into a street and have the light change on them. It just simply doesn't happen. We can change green times for approaches and turn movements, but the ped. phasing is what it is.
Choice of pedestrian phasing alternatives can most certainly affect the Level Of Service of an intersection. I am aware of several cases where engineers are considering the conversion of an exclusive pedestrian phase to a concurrent pedestrian phase precisely because such a change would increase the LOS of the intersection.
I would also contend that "it simply doesn't happen" is not true. I'm aware that the rules and regulations should make it impossible for pedestrians to get caught in an intersection, but they are not always followed properly in the real world. Sometimes procedures fail, for whatever reason. As I mentioned earlier, I know of intersections that are timed for walking speeds as high as 5 f/s, which is far beyond most people's capabilities.
In general, I don't think LOS is an appropriate metric for city streets. It only focuses on one aspect: the delay experienced by automobile drivers, to the exclusion of all other users of the street. LOS is a metric that was originally created to rate limited access highways, and the usage of it to rate city streets/intersections has been an unmitigated disaster for cities. City streets need to fulfill many different roles, of which carrying vehicular traffic is only one, and in many cases, not the most important role.