Based on the video posted in the MBTA Transformation thread, the four car train appears to have two operators. I don't know if that's a specific precaution due to the gap behind the train, or if that's business as usual.
Oh shit wait they were proposing the extension to Brighton be at grade. (I think.) I think they would have immediately been proven wrong and the New Deal funds would have gone towards the construction of such a subway.
archboston.com
If it is a special precaution for four car trains, what might we be looking at going forward if lack of serviceable cars requires shortening a higher number of trains in regular operation? To move the same number of people using 4 car, 2 operator trains as 6 car, 1 operator trains, would require 3 times as many operators.